Browse of TCMCG015C37344 protein

CDS

Accession Number	TCMCG015C37344
gbkey	CDS
Protein Id	XP_027065890.1
Location	join(40105775..40105985,40106344..40106558,40106924..40107067,40107218..40107391,40109210..40109309,40109933..40110051,40110142..40110264,40110366..40110437,40110847..40110939,40111652..40111765,40111913..40112035,40112537..40112722,40112832..40112906,40113664..40113800,40114646..40114780,40115159..40115304,40115423..40115488,40116464..40116570,40116784..40116864,40116957..40117031,40117133..40117234,40119654..40119822,40119923..40120071,40120468..40120551,40120920..40121020,40123550..40123703,40123790..40123864,40123992..40124130,40124883..40125522,40127872..40127932,40128429..40128574,40128649..40128832,40129407..40129505,40130085..40130455,40130601..40130777,40133249..40133345,40133422..40133577,40133672..40133902,40134048..40134131,40134251..40134358)
Gene	LOC113691792
GeneID	113691792
Organism	Coffea arabica

Protein

Length	1940aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA506972
db_source	XM_027210089.1
Definition	rRNA biogenesis protein RRP5-like isoform X1 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGAAGAAATCTCCGAACAAGAAATCATCTAAGAAGCCGTCTTTGATAAATCTTCAGAAGCCATCAAAGAAATCCTTCAAATCAAAACCACCTAGAGACGGCGGCAAAGGCACCAAAACCGAATTGGGCGACCCCGTTTTGTCTCATCAACAAAAGCAAGCTTCACTTGCCCTGCAACTCGAAGATGATGTCCCCGACTTCCCCAGAGGTGGAGGTAGTTCACTGAGTAAACAGGAGCTGGAGGACGTGAGAGCAGAGGTAGATGCAGAGTTTGAGGCAGAGGAGAGAGTTTCGAAGAAGAAGAACAAAAGGGCAAAGCGGTTGGAATGGAGAAGCCAATCGGCAGAAGATGATATGGGCTCCCTTTTTGGTGATGCATTCACCGGAAAGTTGCCTAGGTTTGCAAATAAGATCACTTTGAAGAATATTTCTCCTGGCATGAAGCTTTGGGGCGTAATTTCAGAGGTAAATCAGAAAGATGTTGTGGTTAGTCTTCCAGGGGGTTTGCGTGGGTTAGTTCGTGCGAGTGAAGCATTTGATCCTCTTCCAAATGATGGAGTAAAAGGGGATAAGGAAAGTAATTTTCTTTCAAGCATATATCATGTTGGGCAGCTTGTCTCGTGCATTGTGCAACAAGTGGATGATGAGAAGAAAGAAACTGGGAAAAGAAGAATTTGGCTTTCCCTTCGTCTTTCTTTACTGCACAAAGGCTTGACAATGGATATTATTCAAGAAGGAATGGTTCTTAGTGCATACATAAAAAGCATTGAAGACCATGGTTATACACTTAATTTTGGATTTGGTTCCTTTACTGGATTCATGCCCGAAAGCCGCCAATCTGAAAGAAAGGACACAGAAGTGAAAGTTGGGCAGCTTATTCAAGGGGTCGTTAAAAGCATTGACAAAACTCGAAAATTGCTTTACATGAGCTCTGATTCTGATATGGTGTCAAAATGTGTGACCAAGGACCTTAAAGGTATTTCAATTGATCTTCTCGTTCCAGGCATGATGGTTGATGCTCGTGTTCGGTCATCCCTTGAAAATGGCATCATGTTATCATTCCTCACATACTTCACGGGAACTGTAGATATATTTAACTTAAGTGAGACTTTTCCCTCTGCTAACTGGAAAGATTATTACACTCAAGGCAAGAAGGTCAACGCTCGGATATTATTTATAGATCCTACAACTAGAGCTGTTGGTTTGACTCTGAATCCTCACCTAGTTCATAATAGAGCTCCACCTACACTGGTCCAAACTGGTGATATCTTTGATCAATCGAAAATAATCAGGATTGACAGGGGTTTGGGCCTTTTGCTCGAAATCCCCTCTTCTCCAGTAGCAACCCCTGCGTATGTTAGTGTGTCTGATGTTGCTGACAAGGAAATCAAGAAGCTAGAGAAAAATTTCAAAGAGGGAAGTCTTGTGCGAGTTAGAGTGCTTGGACTTAGGCACTTGGAAGGGCTTGCTACTGGGATTCTGAAGGCTAGTGCTTTTGAAGGGACAGTCTTTACTCATTCAGATGTCAAGCCTGGAATGGTTGTTAAGGCTAAAGTAATTGCAGTTGACAGCTTTGGTGCCATTGTGCAACTTGGAAGCGGTGTGAAAGCACTTTGTCCTCTTCGACACATGTCTGAGTTTGAGATAACAAAACCTAGAAAAAAGTTCCAGGTTGGAGCTGAACTAGTTTTCCGTGTTCTTGGTTGCAAGTCCAAGAGGATCACTGTTACACACAAGAAAACTCTAGTGAAGTCAAAGCTTGAAATTCTTAGTTCATATGCCGATGCCATTGAAGGACTAATAACCCATGGATGGATAACAAATATTGAGAACCATGGATGCTTTGTTCGCTTTTACAATGGTGTACAAGGATTTGCACCAAGATCTGAACTTGGTTTGGATCTGGGATGTGTCATAAATTCAATGTATCATGTCGAGCAGGTTGTGAAATGTAGAGTGACCAGCTCTATACCTGCCTCAAGGAGAATCAACCTTAGTTTCACTGCAAAAAAAACAAGGATTGCTGAAGATGATATGATGAATCTTGGAAGCCTTGTATCTGGAGTTGTTGAGCAAGTAACTCCTCATGCAGTTGTGGTTTGTGTTAACTCCAAAAGTCACATTAAGGGTACCATCTCTCCTGAACATTTATCTGACCACCTAGGGCTTGGTGCATTGCTGAAATCAGTTCTGAAACCTGGACACCAGTTTGACAAACTCTTGGTTCTTGATATTGAAGGCAGCAATCTCATACTCACTGCTAAGTATTCGCTTGTGAATTCTGCCCGAGACCTTCCTTTGGATATCAAGCAAGTTTGCCCTCATTCAATAGTCCATGGATATGTGTGTAATCTAATCGAAGCTGGTTGCTTTGTTCGCTTTGTTGGGCGTTTGACTGGTTTTGCCCCAAAACATAAGGCAGTAGATGACAGGAGATCTGATGTTTCTGAAGTCTTTAGCATTGGTCAATCTGTTCGCTGTAACGTAGTTGATGTTAATAGTGAAACAAATAGAATAACACTTGCATTGAAGCAGTCGTTGTGTTCCTCGACAGATGCATCCTTTATTCGAGAGTACTTTCTTTTGGAAGACAAGATATCTAAACTGCAATTGCTGGGCTCTGAGAGCAGTGAATTAAATTGGGTTGACGAATTCCAAGTTGGAAGTATAATTGAGGGAAAAGTTAATGAAAAAAAGGAGTTTGGTGTGGTTATCAGCTTTGAGAAGTACAAAGACATTTTTGGCTTCATTTCCCAGTACCAGTTGGATGGAATTGCAGTGGATTTTGGTACAACTGTTCAGGCTGCAGTTCTTGATATATCAAAGAGTGAACGGCTGTTGGATTTGTCATTGAAACCACAGTTTGTTGAAAGGTCAAAACGTGAGGGCTCCAGTGTGCACTCTGTTAAGAAGAAACGTGGAAGGGAAACACATAAAGGGCTGGATCTGAAACAAACTGTTCATGCGCAAGTTGAGATTGTGAAAGAGGATTACTTGGTTCTGTCAATACCTACACATAATTTTGCTTTGGGTTATGCCTCGTTTGCTGATTACAATACTCAAATGCTTCCTCGGAAACAGTTTGTTAATGGGCAGAGTGTCGTAGCCACTGTTGCTGATCTTCCAAGTCCATCAACAGGTGGAAGGTTGCTACTACTGCTTAAATCTATGAATGAGGTTATGGATTCATCCACTTCGAAGCGCGCAAAAAGGAAGGCCAACATTGATGTTGGTTCTGTTGTTCAGGCAGAGATTACTGAAATTAAGCCTCTTGAACTTCGAGTAAAATTTGGTTCTGGTTTTCATGGGAGGGTACACATTACCGAGGCTACAGATGATAATCTTGCTGAAGATCCCTTCAACAGCCTCAGGGTTGGCCAGACAGTCAACGCAATGATTGTTTCGAAGTGTAATCGTAACAGAAGCTATCAATGGGAATTGTCCCTAAAACACTCGTTACTTGCAGGTGCTGGTGAAGTAGAAGATGGGCTTCTTGTAGAAGATTTTGATTACCCTATTGGTGGAAGAGTTTCTGGGTTTGTTTATAAAGTGGACAAGGAATGGGCCTGGGTGACTGTATCTCGAGATGTCAGGGCACAATTGTATATTTTGGACAGTGCATCTGAGCCTACTGAACTTGAAAAGTTCGAGAAGCACTTTTACATAGGCATGGCTCTTTCAGGATATGTCATAAAAGCAGATAAGGAGAAAAAATTGTTACGGATTGTCCTGCACCCAATTCTCACTCATGTAGACAGCGCTTGTAGCCTGAGTGACGATTGTTCAACTAGTCCTTTAAATGGGAATAAAGCATGCCATATTAGTGTAGGTGGTTTTGTGGGTGGCAGAATATCTAAAATCCTTCCTGGTGTTGGCGGTGTACTTGTTCAAATTGATCAGCATCTCTATGGTAAGGTTCATTTTACTGAATTGACCAAGGCATGGGTCTCAGATCCACTTGCTGGATATCATGAGGGTCAATTTGTGGAATGCAAAGTCCTTGAAATTTCCCATTCTTTCAAGGGCACTGTACATGTTGATCTGTCACTACGGCTCACTTCGGATGATATGGATCATGGAAAGTTTGCTGATCTCTACCCTAGCATGAACTCCATCAGTCCACGTGTGGAGAATATTGAAGATCTTAAACCAGACATTGTTGTAAAGGGATATGTTAAGAACGTTAGTTCAAGAGGATGTTTTATTATGATTTCTCGGACGGTTGACGCAAAAATCCTCTTGTCAAACTTGTCGGACGGCTTTGTTGAGAATCCAGAGACAGAATTTCCAGTTGGGAAACTTGTCATTGGCAGGGTGATATCTGTCGAACCTTTGTCCAAGCGAGTTGAAGTTACTCTTAAGACATCCAACAGTGTCAGTGTCTCAAAGTTGGACGTAAATTCTTTGAATAAGCTCACTGTTGGAGATTTCATTTCTGGAAGAGTTAAGCGCATTGAGTCATATGGCTTGTTTGTTACCATTGATGACACAAATCTGGTTGGCTTATGCCATGTCTCAGAGCTTTCTGATGAGCACATAGACAACATTGAAACAAAACACAAAGCTGGGGAGGTGGTCAGAGCTAAAGTTTTGAAGGTCGATAAGGAAAGACACCGCATTGCTCTTGGAATGAAAAATTCATATTTCACTGGTGATACAAATGATCAAAAACTTTCAGAACATGGGACTAATTCTGCTATTGAGGAAAATCATGTTTTTGAAGGCACTGGGGCAATAAGTTTTCCAGGGATTGATGATTTTGATATCAAGTCCGACAATGAAAAGCTTTCGGTTCTTGGTAAACTGGAATCGAGGGCTTCAATACAACCTCTTGATGTTCCATTGGATGAAATTGAAAACTCAGATGTGGATAATGTAGTTAATCAAGATCATGAGAATCCCAATGCTGCAGATATTATGGATGAAAAAAGCAAGAAACGTGAAAAGAAGAAAGCAAAGGTGGAGAGGGAACAAGAAATTCAAGCTGCTGAGGAGAGACTTCTAGAAAAAGGTATTCCAAGAAATGCTGATGAATTTGAGAAGCTTATTAGGACCTCCCCAAATAGCAGCTTTGTATGGATAAAGTACATGGCATTCATGCTCTCTTTGGCAGATGTTGAAAAGGCACGTTCCATTGCTGAGAGGGCTTTGAGAACTATAAACATCCGAGAGGAGTCTGAGAAGCTGAACATCTGGGTTGCATACTTCAACTTAGAAAATGAATATGGAAATCCTCCTGAGGAAGCTGTTAAGAAACTATTTTATAGAGCATTACAGTACTGCGATCCCAAAAAGCTGTACCTGGCCCTTCTGGGAATGTATGAAAGGACCGAGCAACATAAGTTGGCTGATGACCTTCTTGGCAAAATGATCAAGAAATTCAAGAGTTCATGCAAAGTTTGGCTAAGACGGGTTCAAAGACTCTTGCAGCAAAACCATGATGGAATACAATCAAATATAAATCGGGCTCTTTTATGTCTACCTCGCCATAAGCATATCAAATTTATTTCACAGACTGCGATTCTTGAGTTCAAATGTGGGGTACCTGACAGGGGGCGATCATTGTTTGAGGGAATGCTGCGCGAGTATCCTAAAAGGATGGACTTGTGGAGCATTTATCTTGACCAGGAGATTCGACTAGGTGATGTAGATGTGATCCGTTCGTTGTTTGAGAGGGCAATAAGTTTGAGCCTTCCCCCTAAGAAAATGAAGTTCTTATTCACGAAGTATCTGGAGTATGAAAAATCTCTTGGTGACGAAGAAAGAGCAAGTACTGTGAGAGAAAAAGCAAGAGAGTATGTTGAGAGCAACGTCAAATGA

Protein:   MAKKSPNKKSSKKPSLINLQKPSKKSFKSKPPRDGGKGTKTELGDPVLSHQQKQASLALQLEDDVPDFPRGGGSSLSKQELEDVRAEVDAEFEAEERVSKKKNKRAKRLEWRSQSAEDDMGSLFGDAFTGKLPRFANKITLKNISPGMKLWGVISEVNQKDVVVSLPGGLRGLVRASEAFDPLPNDGVKGDKESNFLSSIYHVGQLVSCIVQQVDDEKKETGKRRIWLSLRLSLLHKGLTMDIIQEGMVLSAYIKSIEDHGYTLNFGFGSFTGFMPESRQSERKDTEVKVGQLIQGVVKSIDKTRKLLYMSSDSDMVSKCVTKDLKGISIDLLVPGMMVDARVRSSLENGIMLSFLTYFTGTVDIFNLSETFPSANWKDYYTQGKKVNARILFIDPTTRAVGLTLNPHLVHNRAPPTLVQTGDIFDQSKIIRIDRGLGLLLEIPSSPVATPAYVSVSDVADKEIKKLEKNFKEGSLVRVRVLGLRHLEGLATGILKASAFEGTVFTHSDVKPGMVVKAKVIAVDSFGAIVQLGSGVKALCPLRHMSEFEITKPRKKFQVGAELVFRVLGCKSKRITVTHKKTLVKSKLEILSSYADAIEGLITHGWITNIENHGCFVRFYNGVQGFAPRSELGLDLGCVINSMYHVEQVVKCRVTSSIPASRRINLSFTAKKTRIAEDDMMNLGSLVSGVVEQVTPHAVVVCVNSKSHIKGTISPEHLSDHLGLGALLKSVLKPGHQFDKLLVLDIEGSNLILTAKYSLVNSARDLPLDIKQVCPHSIVHGYVCNLIEAGCFVRFVGRLTGFAPKHKAVDDRRSDVSEVFSIGQSVRCNVVDVNSETNRITLALKQSLCSSTDASFIREYFLLEDKISKLQLLGSESSELNWVDEFQVGSIIEGKVNEKKEFGVVISFEKYKDIFGFISQYQLDGIAVDFGTTVQAAVLDISKSERLLDLSLKPQFVERSKREGSSVHSVKKKRGRETHKGLDLKQTVHAQVEIVKEDYLVLSIPTHNFALGYASFADYNTQMLPRKQFVNGQSVVATVADLPSPSTGGRLLLLLKSMNEVMDSSTSKRAKRKANIDVGSVVQAEITEIKPLELRVKFGSGFHGRVHITEATDDNLAEDPFNSLRVGQTVNAMIVSKCNRNRSYQWELSLKHSLLAGAGEVEDGLLVEDFDYPIGGRVSGFVYKVDKEWAWVTVSRDVRAQLYILDSASEPTELEKFEKHFYIGMALSGYVIKADKEKKLLRIVLHPILTHVDSACSLSDDCSTSPLNGNKACHISVGGFVGGRISKILPGVGGVLVQIDQHLYGKVHFTELTKAWVSDPLAGYHEGQFVECKVLEISHSFKGTVHVDLSLRLTSDDMDHGKFADLYPSMNSISPRVENIEDLKPDIVVKGYVKNVSSRGCFIMISRTVDAKILLSNLSDGFVENPETEFPVGKLVIGRVISVEPLSKRVEVTLKTSNSVSVSKLDVNSLNKLTVGDFISGRVKRIESYGLFVTIDDTNLVGLCHVSELSDEHIDNIETKHKAGEVVRAKVLKVDKERHRIALGMKNSYFTGDTNDQKLSEHGTNSAIEENHVFEGTGAISFPGIDDFDIKSDNEKLSVLGKLESRASIQPLDVPLDEIENSDVDNVVNQDHENPNAADIMDEKSKKREKKKAKVEREQEIQAAEERLLEKGIPRNADEFEKLIRTSPNSSFVWIKYMAFMLSLADVEKARSIAERALRTINIREESEKLNIWVAYFNLENEYGNPPEEAVKKLFYRALQYCDPKKLYLALLGMYERTEQHKLADDLLGKMIKKFKSSCKVWLRRVQRLLQQNHDGIQSNINRALLCLPRHKHIKFISQTAILEFKCGVPDRGRSLFEGMLREYPKRMDLWSIYLDQEIRLGDVDVIRSLFERAISLSLPPKKMKFLFTKYLEYEKSLGDEERASTVREKAREYVESNVK